Short peptide-based therapeutic agent and medicinal composition including the same for inhibiting activities of cancer cells

ABSTRACT

The present invention relates to a short peptide-based therapeutic agent and a medicinal composition including the same for inhibiting activities of cancer cells, which includes at least one short peptide listed as SEQ ID NOs: 1 and 2, either of which is unglycosylated and has no more than 40 amino acid residues, thereby specifically reducing or inhibiting activities of cancer cells such as the cancer cell proliferation, cancer stemness, cell migration, cancer cell invasion, metastasis or drug resistance.

RELATED APPLICATIONS

This application is a divisional application of U.S. application Ser.No. 14/841,725, filed Sep. 1, 2015, which claims priority to TaiwanApplication Serial Number 104117476, filed May 29, 2015, which is hereinincorporated by reference.

BACKGROUND Field of Invention

The present invention relates to a peptide and application thereof. Moreparticularly, the present invention relates to a short peptide-basedtherapeutic agent, a medicinal composition including the same and amethod for inhibiting activities of cancer cells by using theaforementioned medicinal composition.

Description of Related Art

Among the cancer patients suffering from metastatic or malignant tumorsthat are unlikely eradicated by surgical intervention, the majority ofcancer patients receive chemotherapy after surgical intervention of theprimary tumor site, for inhibiting the proliferation and metastasis ofpotential cancel cells. However, even when chemotherapy appearssuccessful, cancer patients still face the risk of recurrence of thesame or a drug-resistant cancer. The patients with recurrent cancers,especially the ones with drug-resistant cancers during the chemotherapy,suffer higher risk due to faster metastases occurred in the recurrentcancers.

In the case of carcinomas, it is found that the cancer cells canstimulate the tumor microenvironment to generate various inflammatoryfactors, white blood cells, overgrown blood vessels, proteases and soon. The cancer-related chronic inflammation also influences theproliferation, metastasis and invasion of cancer cells; however, thecauses and the detailed mechanisms of the cancer-related chronicinflammation are still unclear.

In addition to the cancer-related chronic inflammation, in otherresearches, the tumor microenvironment is also highly related tometastasis and chemoresistance. The tumor microenvironment isconstituted of a heterogenous population of stromal cells and otherdifferent types of cells, for protecting the tumor, enabling cancercells to evade and resist the attack of immune cells, thereby conferringdrug resistance to the cancer cells.

Fibroblasts and macrophages in the stroma surrounding the tumor areactivated by CEBPD and induced to generate secretory factors, includingpentraxin-related protein (PTX3). PTX3 has activities of angiogenesis,metastasis and invasion of breast cancer cells, lung cancer cells, andnasopharyngeal cancer cells. In addition, when CEBPD of the cells in thetissue surrounding the tumor is activated, it will facilitate the tumormetastasis and the generation of drug-resistant cancer cells duringchemotherapy, all of which has been evidenced by the inventors of thepresent invention.

There are some commercially available small-molecule anti-cancer drugs,for examples, cis-diammine dichloroplatinum (II) (CDDP; the trade nameof Cisplatin), paclitaxel (the trade name of Taxol), 5-Fluorouracil(5-FU) and the like. However, in recent researches, it is found thatthose commercial small-molecule anti-cancer drugs can activate the CEBPDin fibroblasts and macrophages, resulting in poor cancer treatment suchas drug resistance and fast metastasis of cancer cells.

Accordingly, there is an urgent need to develop a small-moleculeanti-cancer drug, for overcoming the problems of drug resistance andfast metastasis occurred in conventional small-molecule anti-cancerdrugs.

SUMMARY

The invention provides a short peptide-based therapeutic agent, whichincludes at least one short peptide, and any one of the short peptideshas no more than 40 amino acid residues.

Moreover, the invention provides a medicinal composition, which includesa short peptide-based therapeutic agent and a pharmaceuticallyacceptable carrier, in which the short peptide-based therapeutic agentis an active ingredient, and the short peptide-based therapeutic agentincludes at least one short peptide.

Furthermore, the invention provides a method for inhibiting activitiesof cancer cells by using a medicinal composition, in which the medicinalcomposition includes a short peptide-based therapeutic agent and apharmaceutically acceptable carrier, the short peptide-based therapeuticagent is an active ingredient, the short peptide-based therapeutic agentincludes at least one short peptide, thereby specifically reducing orinhibiting activities of cancer cells.

According to the aforementioned aspect, the invention provides a shortpeptide-based therapeutic agent. In an embodiment, the shortpeptide-based therapeutic agent includes at least one short peptidelisted as SEQ ID NOs: 1 and 2, and either of the short peptides isunglycosylated and has no more than 40 amino acid residues forspecifically reducing or inhibiting activities of the cancer cells.

According to the another aspect, the invention provides a medicinalcomposition comprising a short peptide-based therapeutic agent and apharmaceutically acceptable carrier, in which the short peptide-basedtherapeutic agent is an active ingredient, the short peptide-basedtherapeutic agent comprises at least one short peptide listed as SEQ IDNOs: 1 and 2, and either of the short peptides is unglycosylated and hasno more than 40 amino acid residues for specifically reducing orinhibiting activities of the cancer cells.

According to the further aspect, the invention provides a method forinhibiting activities of cancer cells by using a medicinal composition,in which the medicinal composition includes a short peptide-basedtherapeutic agent and a pharmaceutically acceptable carrier, the shortpeptide-based therapeutic agent is an active ingredient. In anembodiment, the short peptide-based therapeutic agent includes at leastone short peptide listed as SEQ ID NOs: 1 and 2, and either of the shortpeptides is unglycosylated and has no more than 40 amino acid residues,thereby specifically reducing or inhibiting activities of cancer cellsin vitro.

According to the aforementioned aspect, the aforementioned medicinalcomposition can be administrated via a subcutaneous injection, anintratumoral injection, an intravenous injection or an oraladministration.

According to the aforementioned aspect, the aforementioned cancer cellscan include but be not limited to breast cancer cells, lung cancercells, nasopharyngeal cancer cells, epithelial cancer cells and anycombination thereof.

According to the aforementioned aspect, the aforementioned activities ofthe cancer cell includes the cancer cell proliferation, cancer stemness,cell migration, cell invasion, metastasis or drug resistance.

With application to the short peptide-based therapeutic agent andmedicinal composition including the same for inhibiting activities ofcancer cells, the short peptide-based therapeutic agent includes atleast one short peptide, and either of the short peptides has no morethan 40 amino acid residues, for inhibiting the activity of PTX3,thereby specifically reducing or inhibiting activities of the cancercell, for example, cancer cell proliferation, cancer stemness, cellmigration, cancer cell invasion, metastasis or drug resistance.

It is to be understood that both the foregoing general description andthe following detailed description are by examples, and are intended toprovide further explanation of the invention as claimed.

BRIEF DESCRIPTION OF THE DRAWINGS

The patent or application file contains at least one drawing executed incolor. Copies of this patent or patent application publication withcolor drawing(s) will be provided by Office upon request and payment ofthe necessary fee. The disclosure can be more fully understood byreading the following detailed description of the embodiment, withreference made to the accompanying drawings as follows.

FIG. 1A is a schematic representation of amino acid sequences of variousshort peptides according to several embodiments of the presentinvention.

FIG. 1B shows a bar diagram of the cell viability (%) of the breastcancer cell MB231 co-cultured with several short peptides of Example 1for 24 hours (upper panel) or 48 hours (lower panel) according toseveral embodiments of the present invention.

FIG. 1C shows an image (left panel) and a bar diagram of numbers (rightpanel) of spheres formed by the breast cancer cells MB231 after 2 weeksof co-culture with polypeptide euPTX3 and several short peptides ofExample 1 in vitro (at 100-fold magnification).

FIG. 1D shows a bar diagram of cell viability (%) of CDDP resistance(left panel) and a bar diagram of cell viability (%) of 5-FU resistance(right panel) of the breast cancer MB231 cells of Example 2 after 1 weekof co-cultivation with polypeptide euPTX3 and several short peptides ofExample 1 in vitro.

FIG. 1E shows a bar diagram of migrated cell numbers (left panel) orinvasive cell number (right panel) of the drug-resistant breast cancerMB231R (MBR) cells of Example 2 after co-cultivation with polypeptideeuPTX3 and several short peptides of Example 1 in vitro.

FIG. 2A shows an image (left panel) and a bar diagram of numbers (rightpanel) of spheres formed by the lung cancer A549 cells after 2 weeks ofco-culture with polypeptide euPTX3 and several short peptides of Example1 in vitro (at 100-fold magnification).

FIG. 2B shows a bar diagram of cell viability (%) of CDDP resistance(left panel) and a bar diagram of cell viability (%) of 5-FU resistance(right panel) of the lung cancer A549 cells of Example 2 after 1 week ofco-cultivation with polypeptide euPTX3 and several short peptides ofExample 1 in vitro.

FIG. 2C shows bar diagrams of migrated cell numbers (left panel) andinvasive cell numbers (right panel) of the lung cancer A549 cells ofExample 2 after 1 week of co-cultivation with polypeptide euPTX3 andseveral short peptides of Example 1 in vitro.

FIG. 3A shows an image (left panel) and a bar diagram of numbers (rightpanel) of spheres formed by the nasopharyngeal cancer HONE1 cells after2 weeks of co-culture with polypeptide euPTX3 and several short peptidesof Example 1 in vitro (at 100-fold magnification).

FIG. 3B shows a bar diagram of cell viability (%) of CDDP resistance(left panel) and a bar diagram of cell viability (%) of 5-FU resistance(right panel) of the nasopharyngeal cancer HONE1 cells of Example 2after 1 week of co-cultivation with polypeptide euPTX3 and several shortpeptides of Example 1 in vitro.

FIG. 3C shows bar diagrams of migrated cell numbers (left panel) andinvasive cell numbers (right panel) of the nasopharyngeal cancer HONE1cells of Example 2 after 1 week of co-cultivation with polypeptideeuPTX3 and several short peptides of Example 1 in vitro.

FIG. 4A shows curve diagrams of tumor size of drug-resistant 4T1R breastcancer inhibited by several short peptides of Example 1 (left panel) orinhibited by combination with several short peptides of Example 1 andCDDP (right panel) in vivo.

FIG. 4B shows bar diagrams of the number of metastatic nodules (leftpanel) and tumor weight (right panel) per lung of mice in FIG. 4A invivo.

FIG. 4C shows images of the tumors of various organs of mice in FIG. 4Ain vivo and epi-fluorescence radiance efficiency.

FIG. 4D shows curve diagrams of tumor size of drug-resistant MB231Rbreast cancer inhibited by several short peptides of Example 1 (leftpanel) or inhibited by combination with several short peptides ofExample 1 and CDDP (right panel) in vivo.

FIG. 4E shows bar diagrams of the number of metastatic nodules (leftpanel) and tumor weight (right panel) per lung of mice in FIG. 4D invivo.

FIG. 4F shows images of the tumors of various organs of mice in FIG. 4Din vivo and epi-fluorescence radiance efficiency.

FIG. 5A is a schematic representation of amino acid sequences of variousshort peptides according to several embodiments of the presentinvention.

FIG. 5B shows bar diagrams of migrated cell numbers (left panel) andinvasive cell numbers (right panel) of the breast cancer MB231R (MBR)cells of Example 2 induced by the polypeptide euPTX3 that can beinhibited in vitro by several short peptides and the polypeptide euPTX3according to several embodiments of the present invention.

DETAILED DESCRIPTION

Reference will now be made in detail to the present embodiments of theinvention, examples of which are illustrated in the accompanyingdrawings. Wherever possible, the same reference numbers are used in thedrawings and the description to refer to the same or like parts.

As aforementioned, the present invention provides a short peptide-basedtherapeutic agent, which includes at least one short peptide, and anyone of the short peptides is unglycosylated and has no more than 40amino acid residues, thereby specifically reducing or inhibiting theactivity of pentraxin-related protein (PTX3).

Typically, the “short peptide” as discussed hereinafter denotes ashort-chain peptide with no more than 40 amino acid residues. In anembodiment, the short peptide-based therapeutic agent includes at leastone short peptide listed as SEQ ID NOs: 1 and 2, in which the amino acidsequences of SEQ ID NOs: 1 and 2 are designed according to the humansequence with GenBank Accession No. NP_002843.2, which is hereinincorporated by reference. In another embodiment, the shortpeptide-based therapeutic agent can use two short peptides listed as SEQID NOs: 1 and 2. It should be mentioned that, if a peptide had more than40 amino acid residues (for example, a polypeptide including SEQ ID NOs:1 and 2), it would be hard to increase the effective dosage of suchpolypeptide in larger molecular weight, and such peptide would alsoinclude ineffective peptide fragments for rendering the subsequentapplication of the short peptide-based therapeutic agent.

In an embodiment, the short peptides listed as SEQ ID NOs: 1 and 2 canbe produced by any conventional method, for example, an artificiallysynthetic peptide, or a recombinant protein expressed in an expressionsystem using a recombinant gene. The method of making the artificiallysynthetic peptide or the recombinant protein should be familiar to oneskilled in the art rather than being recited repetitively herein.

Typically, the “specifically reducing or inhibiting the binding of PTX3receptor to PTX3” as discussed hereinafter denotes that the shortpeptide-based therapeutic agent specifically reduces or inhibits thebinding of PTX3 receptor to endogenous PTX3 via consumptive inhibitionor competitive inhibition.

In an example, the PTX3 can serve as a soluble stimulator. The shortpeptide-based therapeutic agent can be a short peptide listed as SEQ IDNOs: 1 or 2. The short peptide-based therapeutic agent can reduce theactivity of the endogenous (or full-length) PTX3 by competitiveinhibition, or compete binding opportunity of its receptor with theendogenous PTX3, thereby inhibiting the activities of the cancer cells.

In another example, the short peptide-based therapeutic agent can usetwo short peptides listed as SEQ ID NOs: 1 and 2, for further inhibitingthe activities of the cancer cells. It is noted that, the two shortpeptides listed as SEQ ID NOs: 1 and 2 must be unglycosylated peptide.If the short peptides were pre-glycosylated to have the equal or similarbioactivity as the endogenous PTX3, such glycosylated peptides could notinhibit the activity of the endogenous PTX3 via consumptive inhibitionor competitive inhibition.

Typically, the “cancer cells” as discussed hereinafter can include butbe not limited to breast cancer cells, lung cancer cells, nasopharyngealcancer cells, epithelial cancer cells and any combination thereof. Theinhibiting “activities” of the cancer cells as discussed hereinafterdenotes significant inhibition of cancer cell proliferation, cancerstemness, cell migration, cell invasion, metastasis or drug resistanceafter the cancer cells are treated by the short peptide-basedtherapeutic agent of the present invention.

The present invention further provides a medicinal compositioncomprising a short peptide-based therapeutic agent and apharmaceutically acceptable carrier, in which the short peptide-basedtherapeutic agent is an active ingredient as aforementioned.

In application, an effective dosage of the short peptide-basedtherapeutic agent of the present invention and a pharmaceuticallyacceptable carrier can be admixed together and administrated to asubject. The “effective dosage” of the short peptide-based therapeuticagent as discussed hereinafter denotes 5 mg/mL to 20 mg/mL thriceweekly. In another example, the effective dosage of the shortpeptide-based therapeutic agent can be 5 mg/mL to 15 mg/mL thriceweekly. It should be supplemented that, if the effective dosage of theshort peptide-based therapeutic agent was less than 5 mg/mL, it couldnot effectively reduce or inhibit the binding of the PTX3 receptor toPTX3 during a desired duration.

The “pharmaceutically acceptable carrier” as discussed hereinafterrefers to an inactive ingredient itself, which can be a carrier,diluent, adjuvant and/or mediator for delivering the active ingredientto a subject; an additive added into the composition for improving theprocessing or storing properties of the composition; an excipient orother substance for allowing or facilitating the administration at asuitable dose conveniently. The aforementioned pharmaceuticallyacceptable carrier should not destroy the pharmaceutical activity of theactive ingredient, and it is nontoxic when delivering enough therapeuticdose of the active ingredient.

The suitable “pharmaceutically acceptable carrier”, which can be oneswell known by one skilled in the manufacturation of the medicinalcomposition, includes but is not limited to a buffer, diluent,disintegrant, binder, adhesive, humectant, polymer, lubricant, glidant;an additive for masking or neutralizing the unpleasant taste or odor; adye, fragrance and additive for improving the appearance of thecomposition. Specific examples of the pharmaceutically acceptablecarrier can include but be not limited to citrate buffer, phosphatebuffer, acetate buffer, bicarbonate buffer, stearic acid, magnesiumstearate, magnesium oxide, sodium and calcium salts of phosphoric andsulfuric acid, magnesium carbonate, talc, gelatin, arabic gum, sodiumalginate, pectin, dextrin, mannitol, sorbitol, lactose, sucrose, starch,gelatin, cellulose material (such as cellulose esters of alkanoic acidsand cellulose alkyl esters), low melting point wax, cocoa butter, aminoacids, urea, alcohols, ascorbic acid, phospholipids, proteins (such asserum albumin), ethylenediaminetetraacetic acid (EDTA), dimethylsulfoxide (DMSO), sodium chloride or other salts, liposome, glycerol orpowder, polymers (such as polyvinyl pyrrolidone, polyvinyl alcohol, andpolyethylene glycol) and other pharmaceutically acceptable substances.

In application, the short peptide-based therapeutic agent and themedicinal composition including the same can be administrated via asubcutaneous injection, an intratumoral injection, an intravenousinjection or an oral administration, thereby specifically reducing orinhibiting the activity of PTX3 and the activities of the cancer cells.More specifically, as evidenced by the in vitro cell test and in vivoanimal experiment, when the short peptide-based therapeutic agent andthe medicinal composition including the same is applied on the cancercell for a desired duration such as 4 weeks to 10 weeks, the activitiesof the cancer cell, for example, cancer cell proliferation (or alsocalled tumor growth), cancer stemness, cell migration, cell invasion,metastasis (or also called tumor metastasis) or drug resistance, can beinhibited.

Since the short peptide-based therapeutic agent of the present inventionincluding at least one short peptide, either of which has no more than40 amino acid residues, not only specifically reduces or inhibits theactivity of PTX3, but also specifically reduces or inhibits theactivities of the cancer cells, for example, cancer cell proliferation(or also called tumor growth), cancer stemness, cell migration, cellinvasion, metastasis (or also called tumor metastasis) or drugresistance. Therefore, the short peptide-based therapeutic agent can beapplied to the preparation of the medicinal composition for specificallyreducing or inhibiting the activity of PTX3.

Thereinafter, various applications of the short peptide-basedtherapeutic agent and the medicinal composition including the same forinhibiting activities of cancer cells will be described in more detailsreferring to several exemplary embodiments below, while not intended tobe limiting. Thus, one skilled in the art can easily ascertain theessential characteristics of the present invention and, withoutdeparting from the spirit and scope thereof, can make various changesand modifications of the invention to adapt it to various usages andconditions.

Example 1: Preparation of Short Peptide-Based Therapeutic Agent

In this example, artificially synthetic peptides of RI37 (having theamino acid sequence listed as SEQ ID NO:1), GI40 (having the amino acidsequence listed as SEQ ID NO:2) and KT44 (having the amino acid sequencelisted as SEQ ID NO:3) served as the short peptide-based therapeuticagents, and the recombinant pPTX3/C (having the amino acid sequencelisted as SEQ ID NO:4) served as a control group. The designed diagramof short peptides RI37, GI40 and KT44, as well as the recombinant pPTX3,were shown in FIG. 1A. The designed diagram of short peptides RI37 andGI40, as well as the polypeptides euPTX3 and pPTX3/C, were shown in FIG.5A.

The synthesis of the short peptides RI37, GI40 and KT44 were appointedby Kelowna International Scientific Inc. (Taipei, Taiwan). Thepolypeptide pPTX3/C was a recombinant protein expressed and purifiedfrom prior prokaryotic expression system (E. coli). The polypeptideeuPTX3 was a commercially available PTX3 product (purchased from R&Dsystem Inc.), which was a recombinant protein purified from mousemyeloma cells (NS0).

Example 2: Established Model of Cell Tests

In this Example, a human breast cancer cell line [MDA-MB231, DepositAccession Number: BCRC 60425 deposited in Bioresource Collection andResearch Center (BCRC), Taiwan of the Food Industry Research andDevelopment Institute, P.O. Box 246, Hsinchu, Taiwan 300, Republic ofChina, or Deposit Accession Number: ATCC HTB-26; abbreviated hereinafteras MB231] or a CDDP-resistant breast cancer cell line, a human lungcancer cell line A549 (Deposit Accession Number: BCRC 60074 deposited inBCRC; or ATCC CCL-185), a human nasopharyngeal cancer cell line HONE1(Int J. Cancer. 1990 Jan. 15; 45(1):83-9; Proc. Natl. Acad. Sci. USA,Vol. 86, pp. 9524-9528, December 1989) and so on were utilized toevaluate the influence on the inhibition of the cancer cell using theshort peptides of Example 1.

The aforementioned cells could be cultured using its respective cellculturing and subculturing method. For example, MDA-MB231 cell, MBRcell, 4T1 cell, 4T1R cell and A549 cell were cultured in Dulbecco'smodified Eagle medium (DMEM; Gibco Co.) supplemented with 10% fetalbovine serum (FBS) and antibiotics (containing 50-100 μg/mL ofstreptomycin and 50-100 U/mL of penicillin). HONE1 cell was cultured inRPMI-1640 medium supplemented with 10% FBS and antibiotics. Those cellswere incubated at 37° C. in humidified 5% CO₂, the conditions of whichwere well known by one skilled in the art rather than being recited indetail herein.

Example 3: Evaluation of Influence of Inhibition of Activities of CancerCell Using Short Peptide-Based Therapeutic Agent

Hereinafter, the cells of Example 2 was added and co-cultured with theshort peptide-based therapeutic agents of Example 1, and later evaluatedaccording to the following methods.

1. Evaluation of Influence of Cancer Cell Proliferation Using ShortPeptides

After the human breast cancer MB231 cell of Example 2 was co-culturedwith the short peptides RI37, GI40 and KT44 of Example 1 for 24 hours or48 hours, the cell toxicity was analyzed by using MTT[3-(4,5-dimethylthiazol-2-yl)-2,5-diphenol tetrazolium bomide] (Sigma).The transparent and colorless tetrazolium salt of MTT was degraded bymitochondrial dehydrogenase in live cells and converted to blue formazancrystals. Based on the cell viability of the cell in the absence of theshort peptides of Example 1 as 100%, the influence of the cancer cellproliferation could be determined by using the short peptides.

Reference was made to FIG. 1B, which showed a bar diagram of the cellviability (%) of the breast cancer MB231 cell co-cultured with severalshort peptides of Example 1 for 24 hours (upper panel) or 48 hours(lower panel) according to several embodiments of the present invention.In FIG. 1B, the symbol “-” below the horizontal axis referred to thecell cultured in the absence of the specific short peptide, the trianglesymbol referred to the cell cultured in an increasing amount of thespecific short peptide. According to the result shown in FIG. 1B, thebreast cancer MB231 cell co-cultured with the short peptides RI37, GI40and KT44 of Example 1 for 24 hours or 48 hours had no significantinfluence on the cell viability.

2. Evaluation of Influence of Cancer Stemness of Cancer Cells UsingShort Peptides

The breast cancer MB231 cells, the lung cancer A549 cells and thenasopharyngeal cancer HONE1 cells had cancer stemness, and those cancercells could form spheres co-cultured with the polypeptide euPTX3.Hereinafter, those cancer cells were co-cultured with the short peptidesRI37, GI40, KT44 and the polypeptide euPTX3 of Example 1, for evaluatingthe influence of cancer stemness of the cancer cells using several shortpeptides of Example 1.

Each well of the multi-well plate with ultra-low attachment surface(Corning Inc.) was inoculated with the cell density 5×10³ cells/well ofthe breast cancer MB231 cell, the lung cancer A549 cell and thenasopharyngeal cancer HONE1 cell, all of which were co-cultured with theshort peptides R137, GI40, KT44 (10 μg/mL or 225 nM of the shortpeptide) and the polypeptide euPTX3 (2.5 μg/mL) of Example 1 inserum-free medium DMEM/F12 (Gibco) [containing B27 (Invitrogen), 20ng/mL of epidermal growth factor (EGF; Abcam) and 10 ng/mL of basicFibroblast Growth Factor (bFGF; Peprotech)]. After 2 weeks ofcultivation, the cell spheres were observed by optical microscopy.

Reference was made to FIGS. 1C, 2A and 3A. FIG. 1C showed an image (leftpanel) and a bar diagram of numbers (right panel) of spheres formed bythe breast cancer MB231 cells after 2 weeks of co-culture with severalshort peptides of Example 1 in vitro. FIG. 2A showed an image (leftpanel) and a bar diagram of numbers (right panel) of spheres formed bythe lung cancer A549 cells after 2 weeks of co-culture with severalshort peptides of Example 1 in vitro. FIG. 3A showed an image (leftpanel) and a bar diagram of numbers (right panel) of spheres formed bythe nasopharyngeal cancer HONE1 cells after 2 weeks of co-culture withseveral short peptides of Example 1 in vitro. The images (left panel) ofFIGS. 1C, 2A and 3A were taken at 100-fold magnification, and thesymbols “-” below the horizontal axis of the bar diagrams (right panel)of FIGS. 1C, 2A and 3A referred to the cells cultured in the absence ofthe specific short peptide.

According to the result shown in FIGS. 1C, 2A and 3A, in comparison withthe cancer cells only co-cultured with the polypeptide euPTX3, thebreast cancer MB231 cell, the lung cancer A549 cell and thenasopharyngeal cancer HONE1 cell were co-cultured with the polypeptideeuPTX3 and the short peptides RI37 or GI40, the cancer cells co-culturedwith the short peptide RI37 or GI40 could effectively inhibit the numberof spheres induced by the polypeptide euPTX3, and the differences ofnumbers had static significance. However, the cancer cells co-culturedwith the short peptide KT44 could not inhibit the number of spheresinduced by the polypeptide euPTX3.

3. Evaluation of Influence of Drug Resistance of Cancer Cell Using ShortPeptides

The breast cancer MB231 cell, the lung cancer A549 cell and thenasopharyngeal cancer HONE1 cell had drug resistance, and the drugresistance of those cancer cells could be induced by adding thepolypeptide euPTX3. Hereinafter, those cancer cells were co-culturedwith the short peptides RI37, GI40, KT44 and the polypeptide euPTX3 ofExample 1, for evaluating the influence of drug resistance of the cancercells using several short peptides of Example 1.

The cell density 1×10⁴ cells/well of the breast cancer MB231 cell, thelung cancer A549 cell and the nasopharyngeal cancer HONE1 cell wereco-cultured with the short peptides RI37, GI40 and KT44 (10 μg/mL or 225nM of the short peptide) and the polypeptide euPTX3 (2.5 μg/mL) ofExample 1. After 1 week of cultivation, those cancer cells were addedwith 40 μM of CDDP or 100 μM of 5-FU respectively and cultured for 48hours. Based on the cell viability of the cells only co-cultured withthe polypeptide euPTX3 (2.5 μg/mL) as 100%, the influence of drugresistance of the cancer cells of Example 2 using the short peptides ofExample 1 could be determined according to the aforementioned MTT assay.

Reference was made to FIGS. 1D, 2B and 3B. FIG. 1D showed a bar diagramof cell viability (%) of CDDP resistance (left panel) and a bar diagramof cell viability (%) of 5-FU resistance (right panel) of the breastcancer cells MB231 of Example 2 after 1 week of co-cultivation withseveral short peptides of Example 1 in vitro. FIG. 2B showed a bardiagram of cell viability (%) of CDDP resistance (left panel) and a bardiagram of cell viability (%) of 5-FU resistance (right panel) of thelung cancer cells A549 of Example 2 after 1 week of co-cultivation withseveral short peptides of Example 1 in vitro. FIG. 3B showed a bardiagram of cell viability (%) of CDDP resistance (left panel) and a bardiagram of cell viability (%) of 5-FU resistance (right panel) of thenasopharyngeal cancer cells HONE1 of Example 2 after 1 week ofco-cultivation with several short peptides of Example 1 in vitro. Thesymbols “-” below the horizontal axis of the bar diagrams (right panel)of FIGS. 1D, 2B and 3B referred to the cells cultured in the absence ofthe specific short peptide.

According to the results shown in FIGS. 1D, 2B and 3B, in comparisonwith the cancer cells cultured without the polypeptide euPTX3, thebreast cancer MB231 cell, the lung cancer A549 cell and thenasopharyngeal cancer HONE1 cell, which were only co-cultured with thepolypeptide euPTX3, could have increase drug resistance to CDDP or 5-FU,and the cell viability of those cancer cells could be also increased.

However, those cancer cells co-cultured with the short peptide RI37 orGI40 could effectively inhibit the drug resistance induced by thepolypeptide euPTX3, and the differences of cell viabilities had staticsignificance, in which the short peptide RI37 had stronger inhibitoryeffect on the drug resistance, followed by the short peptide GI40, butthe short peptide KT44 could not significantly inhibit the drugresistance induced by the polypeptide euPTX3.

4. Evaluation of Influence of Migration of Cancer Cell Using ShortPeptides

The breast cancer MB231 cell, the lung cancer A549 cell and thenasopharyngeal cancer HONE1 cell could migrate, and cancer cellmigration could be promoted by adding the polypeptide euPTX3.Hereinafter, those cancer cells were co-cultured with the short peptidesRI37, GI40, KT44 and the polypeptide euPTX3 of Example 1, for evaluatingthe influence of the cancer cell migration using several short peptidesof Example 1.

The cell density 5×10⁴ cells/well of the breast cancer MB231 cell, thelung cancer A549 cell and the nasopharyngeal cancer HONE1 cell wereseeded into each upper insert of 24-well plate (containing 8-μm poreinsert per well; BD Biosciences) for 19 hours, and each lower well wasadded with the short peptides RI37, GI40 and KT44 (10 μg/mL or 225 nM ofthe short peptide) and the polypeptide euPTX3 (2.5 μg/mL) of Example 1,for evaluating the influence of migration of the cancer cell of Example2 using several short peptides of Example 1.

The cell density 5×10⁴ cells/well of the breast cancer MB231 cell, thelung cancer A549 cell and the nasopharyngeal cancer HONE1 cell wereseeded into each upper insert of Boyden chamber for 3 hours ofcultivation.

And then, the medium in each upper insert was replaced by serum-freemedium, and the medium in each lower well was added with the shortpeptides RI37, GI40, KT44 and the polypeptide euPTX3 of Example 1. Thecells inside each upper insert were wiped with cotton swabs and removedafter 16 hours of cultivation. Remaining cells that had migrated to thebottom of the insert membrane were stained by4′,6-diamidino-2-phenylindole (DAPI; Invitrogen) and calculated underfluorescence microscopy with 200-fold magnification.

Reference was made to FIGS. 1E (left panel), 2C (left panel), 3C (leftpanel) and 5B (left panel). The left panel of FIG. 1E was depicted to abar diagram of migrated cell numbers of the drug-resistant breast cancerMB231R (MBR) cells of Example 2 after 1 week of co-cultivation withseveral short peptides of Example 1 in vitro. The left panel of FIG. 2Cwas depicted to a bar diagram of migrated cell numbers of the lungcancer A549 cells of Example 2 after 1 week of co-cultivation withseveral short peptides of Example 1 in vitro. The left panel of FIG. 3Cwas depicted to a bar diagram of migrated cell numbers of thenasopharyngeal cancer HONE1 cells of Example 2 after 1 week ofco-cultivation with several short peptides of Example 1 in vitro. In theleft panels of FIG. 1E, FIG. 2C and FIG. 3C, the concentration of thepolypeptide euPTX3 was 2.5 μg/mL, and the concentration of the shortpeptides RI37, GI40, KT44 was 10 μg/mL.

The left panel of FIG. 5B was depicted to a bar diagram of migrated cellnumbers of the breast cancer MB231R (MBR) cells of Example 2 afterco-cultivation with several short peptides of Example 1 in vitro. In theleft panel of FIG. 5B, the concentration of the polypeptide euPTX3 was2.5 μg/mL, the concentration of the short peptide RI37 was 3.7 μg/mL,the concentration of the short peptide GI40 was 4 μg/mL, and theconcentration of the pPTX3/C was 10 μg/mL, so that the polypeptideeuPTX3, the short peptide RI37, the short peptide GI40, the pPTX3/C hadthe identical molecular number. The symbols “-” below the horizontalaxis of the bar diagrams (left panels) of FIGS. 1E, 2C, 3C and 5Breferred to the cells cultured in the absence of the specific shortpeptide.

According to the results shown in left panels of FIGS. 1E, 2C, 3C and5B, in comparison with the cancer cells only cultured with thepolypeptide euPTX3, the breast cancer MB231 cell, the lung cancer A549cell and the nasopharyngeal cancer HONE1 cell, which were onlyco-cultured with the polypeptide euPTX3, could have increase migratedcell numbers. However, those cancer cells co-cultured with the shortpeptide RI37 or GI40 could effectively inhibit the migrated cell numbersinduced by the polypeptide euPTX3, and the differences of migrated cellnumbers had static significance, but the short peptide KT44 could notinhibit the migrated cell numbers induced by the polypeptide euPTX3.

It should be supplemented that, the left panel of FIG. 5B furtherevidenced that the combination with the short peptides RI37 and GI40could provide better inhibition effect of migrated cell numbers inducedby the polypeptide euPTX3. Although the pPTX3/C can inhibit migratedcell numbers induced by the polypeptide euPTX3, the polypeptide euPTX3,which had larger molecule including the fragments of the short peptidesRI37, KT44 and GI40, would render the subsequent application to theshort peptide-based therapeutic agent, and it would difficult toincrease its effective dosage due to its larger molecular weight.Moreover, pPTX3/C produced by E. coli had no activating group forglycosylation introduced into pPTX3/C produced by E. coli; however, therecombinant protein produced by E. coli was easily contaminated byendotoxin (LPS), so that it would be higher risk of such recombinantprotein for directly treating human. Therefore, the short peptides RI37,KT44 and GI40 synthesized artificially and chemically had advantage oftheir smaller molecular weight and solution of problems of endotoxincontamination.

5. Evaluation of Influence of Invasion of Cancer Cell Using ShortPeptides

The breast cancer MB231 cell, the lung cancer A549 cell and thenasopharyngeal cancer HONE1 cell could invade, and cancer cell invasioncould be promoted by adding the polypeptide euPTX3. Hereinafter, thosecancer cells were co-cultured with the short peptides RI37, GI40, KT44and the polypeptide euPTX3 of Example 1, for evaluating the influence ofthe cancer cell invasion using several short peptides of Example 1.

The cell density 5×10⁴ cells/well of the breast cancer MB231 cell, thelung cancer A549 cell and the nasopharyngeal cancer HONE1 cell wereseeded into each upper insert of 24-well plate (containing 8-μm poreinsert per well; BD Biosciences), the upper insert and the lower wellwere separated by the polyethelene terephthalate membrane coated withmatrigel (purchased from BD Bioscience), and cultured for 3 hours.

Next, the medium in each upper insert was replaced by serum-free medium,and the medium in each lower well was added with the short peptidesRI37, GI40, KT44 and the polypeptide euPTX3 and pPTX3/C of Example 1.The cells inside each upper insert were wiped with cotton swabs andremoved after 16 hours of cultivation. Remaining cells that had migratedto the bottom of the insert membrane were stained by 4′,6-diamidino-2-phenylindole (DAPI; Invitrogen) and calculated underfluorescence microscopy with 200-fold magnification.

Reference was made to FIGS. 1E (right panel), 2C (right panel), 3C(right panel) and 5B (right panel). The right panel of FIG. 1E wasdepicted to a bar diagram of invasive cell numbers of the drug-resistantbreast cancer MB231R (MBR) cells of Example 2 after co-cultivation withseveral short peptides of Example 1 in vitro. The right panel of FIG. 2Cwas depicted to a bar diagram of invasive cell numbers of the lungcancer A549 cells of Example 2 after co-cultivation with several shortpeptides of Example 1 in vitro. The right panel of FIG. 3C was depictedto a bar diagram of invasive cell numbers of the nasopharyngeal cancerHONE1 cells of Example 2 after co-cultivation with several shortpeptides of Example 1 in vitro. In the right panel of FIG. 1E, the rightpanel of FIG. 2C and the right panel of FIG. 3C, the concentration ofthe polypeptide euPTX3 was 2.5 μg/mL, and the concentration of the shortpeptides RI37, GI40, KT44 was 10 μg/mL.

The right panel of FIG. 5B was depicted to a bar diagram of invasivecell numbers of the breast cancer MB231R (MBR) cells of Example 2 afterco-cultivation with several short peptides of Example 1 in vitro. In theright panel of FIG. 5B, the concentration of the polypeptide euPTX3 was2.5 μg/mL, the concentration of the short peptide RI37 was 3.7 μg/mL,the concentration of the short peptide GI40 was 4 μg/mL, and theconcentration of the pPTX3/C was 10 μg/mL, so that the polypeptideeuPTX3, the short peptide RI37, the short peptide GI40, the pPTX3/C hadthe identical molecular number. The symbols “-” below the horizontalaxis of the bar diagrams (right panels) of FIGS. 1E, 2C, 3C and 5Breferred to the cells cultured in the absence of the specific shortpeptide.

According to the results shown in right panels of FIGS. 1E, 2C, 3C and5B, in comparison with the cancer cells only cultured with thepolypeptide euPTX3, the breast cancer MB231 cell, the lung cancer A549cell and the nasopharyngeal cancer HONE1 cell, which were onlyco-cultured with the polypeptide euPTX3, could have increase invasivecell numbers. However, those cancer cells co-cultured with the shortpeptide RI37 or GI40 could effectively inhibit the invasive cell numbersinduced by the polypeptide euPTX3, and the differences of invasive cellnumbers had static significance, but the short peptide KT44 could notinhibit the invasive cell numbers induced by the polypeptide euPTX3.

It should be supplemented that, the right panel of FIG. 5B furtherevidenced that the combination with the short peptides RI37 and GI40could provide better inhibition effect of invasive cell numbers inducedby the polypeptide euPTX3 in comparison to the only use of the shortpeptides RI37 or GI40. Although the pPTX3/C can inhibit invasive cellnumbers induced by the polypeptide euPTX3, the polypeptide euPTX3, whichhad larger molecule including the fragments of the short peptides RI37,KT44 and GI40, would render the subsequent application to the shortpeptide-based therapeutic agent, and it would difficult to increase itseffective dosage due to its larger molecular weight. Moreover, pPTX3/Cproduced by E. coli had no activating group for glycosylation introducedinto pPTX3/C produced by E. coli; however, the recombinant proteinproduced by E. coli was easily contaminated by endotoxin (LPS), so thatit would be higher risk of such recombinant protein for directlytreating human. Therefore, the short peptides RI37, KT44 and GI40synthesized artificially and chemically had advantage of their smallermolecular weight and solution of problems of endotoxin contamination.

Example 4: Evaluation of the Influence of Tumor Using Short Peptides inAnimal Experiment Model

1. Establishment of Animal Experiment Model

In this Example, 1×10⁶ mCherry fluorescent protein-labeledCDDP-resistant mouse 4T1 cells (4T1R; ATCC CRL-2539) were inoculatedsubcutaneously to the rear side of the back of six to eight-week-oldfemale BALB/c mice (purchased from Laboratory Animal Center of NationalCheng Kung University). After 1 week of inoculation, the mice wereintraperitoneally injected with 5 mg/kg of CDDP [dissolved in 1% (w/v)DMSO] or only 1% (w/v) of DMSO once weekly, and intratumorallyuninjected or injected with 50 μg of the short peptides RI37, GI40 andKT44 of Example 1 twice weekly. The mice were sacrificed after six weeksof inoculation. Spleen, kidneys, lungs and liver were obtained, tumorweight of those organs were measured according to 6 replications pergroup, and the metastatic activity and the number of metastatic nodulesper organ were confirmed by IVIS Spectrum Imaging System 200 (Caliper).The tumor size was measured by a commercial external caliper, and thetumor volume (V) was calculated by the following formula (I):V=(w×l ²)×0.52  (I)

In the formula (I), w was referred to tumor width, l was referred totumor length. Each condition of the experiment was repeated at leastthrice.

Besides, 1×10⁶ mCherry fluorescent protein-labeled CDDP-resistant humanMDA-MB-231 cells (MB231R; ATCC CRL-2539) were inoculated subcutaneouslyto the rear side of the back of six to eight-week-old female NOD-SCIDimmunodeficiency mice (purchased from Laboratory Animal Center ofNational Cheng Kung University). After 1 week of inoculation, the micewere intraperitoneally injected with 5 mg/kg of CDDP [dissolved in 1%(w/v) DMSO] or only 1% (w/v) of DMSO once weekly, and intratumorallyuninjected or injected with 50 μg of the short peptides RI37, GI40 andKT44 of Example 1 twice weekly. The mice were sacrificed after ten weeksof inoculation. Spleen, kidneys, lungs and liver were obtained, tumorweight of those organs were measured according to 3 replications pergroup, and the metastatic activity and the number of metastatic nodulesper organ were confirmed by IVIS Spectrum Imaging System. The tumor sizewas measured by a commercial external caliper, and the tumor volume (V)was calculated by the following formula (I). Each condition of theexperiment was repeated at least thrice.

2. Evaluation of Influence of Allograft Tumor Using Short Peptides

Reference was made to FIG. 4A, which showed curve diagrams of tumor sizeof drug-resistant 4T1R breast cancer inhibited by several short peptidesof Example 1 (left panel) or inhibited by combination with several shortpeptides of Example 1 and CDDP (right panel) in vivo. According to theresults shown in FIG. 4A, the short peptides RI37 and GI40 of Example 1could inhibit tumor growth, reduce the drug resistance generated by thetumor from drug-resistant 4T1R breast cancer cell, in which the shortpeptide RI37 had stronger inhibitory effect on the tumor growth,followed by the short peptide GI40, but the short peptide KT44 could notsignificantly inhibit the tumor growth.

Reference was made to FIG. 4B, which showed bar diagrams of the numberof metastatic nodules (left panel) and tumor weight (right panel) perlung of mice in FIG. 4A in vivo. According to the results shown in FIG.4B, the short peptides RI37 and GI40 of Example 1 could inhibit tumormetastasis and growth, in which the short peptide RI37 had strongerinhibitory effect on the tumor growth, followed by the short peptideGI40, but the short peptide KT44 could not significantly inhibit tumormetastasis and growth.

Reference was made to FIG. 4C, which showed images of the tumors ofvarious organs of mice in FIG. 4A in vivo and epi-fluorescence radianceefficiency. According to the results shown in FIG. 4C, the shortpeptides RI37 and GI40 of Example 1 could inhibit tumor metastasis andgrowth, but the short peptide KT44 could not significantly inhibit tumormetastasis and growth, and metastatic nodules was found in lungs in thecase of the short peptide KT44.

3. Evaluation of Influence of Xenograft Tumor Using Short Peptides

Reference was made to FIG. 4D, which showed curve diagrams of tumor sizeof drug-resistant breast cancer MB231R cells inhibited by several shortpeptides of Example 1 (left panel) or inhibited by combination withseveral short peptides of Example 1 and CDDP (right panel) in vivo.According to the results shown in FIG. 4D, the short peptides RI37 andGI40 of Example 1 could inhibit tumor growth, reduce the drug resistancegenerated by the tumor from drug-resistant breast cancer MB231R cell, inwhich the short peptide RI37 had stronger inhibitory effect on the tumorgrowth, followed by the short peptide GI40, but the short peptide KT44could not significantly inhibit the tumor growth.

Reference was made to FIG. 4E, which showed bar diagrams of the numberof metastatic nodules (left panel) and tumor weight (right panel) perlung of mice in FIG. 4D in vivo. According to the results shown in FIG.4E, the short peptides RI37 and GI40 of Example 1 could inhibit tumormetastasis and growth, in which the short peptide RI37 had strongerinhibitory effect on the tumor growth, followed by the short peptideGI40, but the short peptide KT44 could not significantly inhibit tumormetastasis and growth.

Reference was made to FIG. 4F, which showed images of the tumors ofvarious organs of mice in FIG. 4D in vivo and epi-fluorescence radianceefficiency. According to the results shown in FIG. 4F, the shortpeptides RI37 and GI40 of Example 1 could inhibit tumor metastasis andgrowth, but the short peptide KT44 could not significantly inhibit tumormetastasis and growth, and metastatic nodules was found in lungs in thecase of the short peptide KT44.

All data of those embodiments were obtained from triplet replications ineach time point and each sample as mean plus or minus the averagedstandard deviation. All data were analyzed in one way ANOVA. In theaforementioned embodiments, the symbol “*” was denoted to the datahaving static significance (p<0.05), the symbol “**” was denoted to thedata having static significance (p<0.01), and the symbol “***” wasdenoted to the data having static significance (p<0.001).

In summary, the aforementioned embodiments evidence that the shortpeptides RI37 and/or GI40 of Example 1 having no more than 40 amino acidresidues can effectively inhibit the activity of endogenous PTX3,thereby specifically reducing or inhibiting activities of the cancercells, for example, cancer cell proliferation, cancer stemness, cellmigration, cancer cell invasion, metastasis or drug resistance.Therefore, the short peptides of Example 1 can serve as the shortpeptide-based therapeutic agent for applying to the preparation of themedicinal composition for specifically reducing or inhibiting theactivity of PTX3.

It is necessarily supplemented that, specific short peptides, specificprocesses, specific analysis methods or specific apparatuses areexemplified for clarifying the short peptide-based therapeutic agent andmedicinal composition including the same for inhibiting the activity ofPTX3. However, as is understood by a person skilled in the art, othershorter peptides, other processes, other analysis methods or otherapparatuses can be also adopted in the short peptide-based therapeuticagent and medicinal composition including the same of the presentinvention.

According to the embodiments of the present invention, the shortpeptide-based therapeutic agent and the medicinal composition includingthe same are beneficial to adapt the short peptides RI37 and/or GI40having no more than 40 amino acid residues, which can effectivelyinhibit the activity of endogenous PTX3, thereby specifically reducingor inhibiting activities of the cancer cells, for example, cell cancerproliferation, cancer stemness, cell migration, cancer cell invasion,metastasis or drug resistance.

Although the present invention has been described in considerable detailwith reference to certain embodiments thereof, other embodiments arepossible. Therefore, the spirit and scope of the appended claims shouldnot be limited to the description of the embodiments contained herein.

What is claimed is:
 1. A method for inhibiting activities of cancercells associated with pentraxin-related protein (PTX3) by using amedicinal composition, wherein the medicinal composition comprises atherapeutic agent and a pharmaceutically acceptable carrier, thetherapeutic agent comprises at least one unglycosylated peptideconsisting of SEQ ID NO: 1 as an active ingredient, and wherein the atleast one unglycosylated peptide specifically reduces or inhibitsactivities of the cancer cells, and the cancer cells are selected fromthe group consisting of lung cancer cells, nasopharyngeal cancer cells,breast cancer cells, and epithelial cancer cells.
 2. The method of claim1, wherein the medicinal composition is administrated via a subcutaneousinjection, an intratumoral injection, an intravenous injection or anoral administration.
 3. The method of claim 1, wherein the cancer cellsare breast cancer cells.
 4. The method of claim 1, wherein theactivities of the cancer cells comprises metastasis.
 5. The method ofclaim 1, wherein the activities of the cancer cells comprises cancercell proliferation.
 6. The method of claim 1, wherein the activities ofthe cancer cells comprises cancer sternness.
 7. The method of claim 1,wherein the activities of the cancer cells comprises cell migration. 8.The method of claim 1, wherein the activities of the cancer cellscomprises cell invasion.
 9. The method of claim 1, wherein theactivities of the cancer cells comprises drug resistance.